MLOC_52944 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.11572100.07037080.0824221
LEAShoots from the seedlings (10 cm shoot stage)0.04132660.044917400.039622
INF1Young developing inflorescences (5mm)4.213111.92144.59863.50129
INF2Developing inflorescences (1-1.5 cm)26.874124.944425.916333.534
ROORoots from the seedlings (10 cm shoot stage)0.15557800.07516380.063226
NODDeveloping tillers at six leaf stage, 3rd internode00.05091720.05925940.323515
CAR5Developing grain, bracts removed (5 DPA)47.320253.18455.307863.939
CAR15Developing grain, bracts removed (15 DPA)5.457973.905695.5514314.0255



CDS Structure of MLOC_52944






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK374272
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374272CUST_22635_PI427708080NoneNoneNone
MLOC_52944.1NoneAvailableAvailablecontig_37927 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----