- Predicted Gene MLOC_52923
MLOC_52923 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 7.74264 | 5.97462 | 6.4648 | 6.81416 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 7.17993 | 1.23287 | 3.90968 | 3.45703 |
| INF1 | Young developing inflorescences (5mm) | 38.2 | 38.9589 | 32.2271 | 34.3432 |
| INF2 | Developing inflorescences (1-1.5 cm) | 26.6353 | 28.6918 | 25.4372 | 33.4602 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 5.58051 | 5.41095 | 6.25182 | 6.60964 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.26963 | 0.20739 | 0.134777 | 0.557905 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 10.8936 | 14.5352 | 10.164 | 13.0191 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.567972 | 0.0544742 | 0.482129 | 0.912409 |
CDS Structure of MLOC_52923
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52923.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g40240.1 |
+1 |
2e-32 |
117 |
49/60 (82%) |
13107.m04181 protein GASR9 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed |
| TAIR PP10 |
AT5G59845.1 |
+1 |
3e-17 |
76 |
36/63 (57%) |
Gibberellin-regulated family protein | chr5:24111443-24111808 FORWARD LENGTH=89 |