MLOC_5291 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 10.9914 | 16.3565 | 16.6894 | 15.5912 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 24.4183 | 15.7174 | 19.1025 | 17.6638 |
| INF1 | Young developing inflorescences (5mm) | 18.3904 | 21.2532 | 19.5738 | 17.1827 |
| INF2 | Developing inflorescences (1-1.5 cm) | 31.8065 | 30.0261 | 29.928 | 33.8881 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 30.618 | 21.0011 | 16.8612 | 27.7991 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 10.4806 | 14.0162 | 11.2102 | 48.4593 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 29.9446 | 26.827 | 23.0918 | 26.174 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 16.9329 | 15.6524 | 15.3222 | 37.5458 |
CDS Structure of MLOC_5291
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5291.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g31540.1 |
+3 |
0.0 |
945 |
604/991 (61%) |
13107.m03195 protein ubiquitin family protein, putative, expressed |
| TAIR PP10 |
AT5G42220.1 |
+3 |
3e-70 |
254 |
180/439 (41%) |
Ubiquitin-like superfamily protein | chr5:16872962-16877455 FORWARD LENGTH=879 |
