- Predicted Gene MLOC_52907
MLOC_52907 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.71126 | 3.18293 | 4.73624 | 4.05717 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 6.41769 | 9.40574 | 13.646 | 7.75465 |
| INF1 | Young developing inflorescences (5mm) | 1.32094 | 1.41553 | 1.39849 | 1.17645 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.88886 | 1.59413 | 1.34494 | 1.78928 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 28.7674 | 16.0686 | 27.0556 | 21.922 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 28.0573 | 26.9927 | 42.7764 | 79.0789 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 6.38887 | 7.49187 | 6.9972 | 6.69774 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.18835 | 1.00522 | 0.965417 | 2.61681 |
CDS Structure of MLOC_52907
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52907.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g14590.1 |
+2 |
6e-154 |
473 |
255/343 (74%) |
13103.m01708 protein calcium-binding EF hand family protein, putative, expressed |
| TAIR PP10 |
AT4G38810.2 |
+2 |
3e-112 |
360 |
191/346 (55%) |
Calcium-binding EF-hand family protein | chr4:18115607-18118860 REVERSE LENGTH=375 |