- Predicted Gene MLOC_52848
MLOC_52848 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 84.2324 | 51.9553 | 58.7348 | 52.8685 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 27.1485 | 19.5413 | 33.6971 | 18.945 |
| INF1 | Young developing inflorescences (5mm) | 18.9344 | 26.2412 | 27.2864 | 16.5182 |
| INF2 | Developing inflorescences (1-1.5 cm) | 12.5756 | 15.6968 | 12.5809 | 12.804 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 77.5522 | 47.4766 | 52.7677 | 50.4087 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 55.0763 | 49.6209 | 21.3587 | 122.57 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 18.6063 | 20.1846 | 20.6703 | 15.81 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.03662 | 5.96918 | 4.9998 | 10.2903 |
CDS Structure of MLOC_52848
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52848.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g45320.1 |
-2 |
2e-19 |
84 |
39/50 (78%) |
13107.m04773 protein COX VIIa, putative, expressed |
| TAIR PP10 |
AT4G21105.1 |
-2 |
1e-14 |
66 |
30/50 (60%) |
cytochrome-c oxidases;electron carriers | chr4:11266273-11266724 FORWARD LENGTH=68 |