MLOC_52847 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.361331.946071.85582.41383
LEAShoots from the seedlings (10 cm shoot stage)2.703652.206123.073682.54204
INF1Young developing inflorescences (5mm)4.957194.409535.999485.02149
INF2Developing inflorescences (1-1.5 cm)7.348637.809687.359789.63758
ROORoots from the seedlings (10 cm shoot stage)2.455032.164672.591433.27637
NODDeveloping tillers at six leaf stage, 3rd internode2.455432.47712.864279.18991
CAR5Developing grain, bracts removed (5 DPA)2.688462.912.566093.22239
CAR15Developing grain, bracts removed (15 DPA)1.867891.91281.689855.04271



CDS Structure of MLOC_52847






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_52847.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252953.1NoneNoneNoneNone
MLOC_52847.1CUST_3019_PI427708080AvailableAvailablecontig_37847 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g45330.1 +1 2e-138 414 233/375 (62%) 13107.m04774 protein expressed protein
TAIR PP10None-----