MLOC_52843 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.759627.177477.604387.47692
LEAShoots from the seedlings (10 cm shoot stage)13.99458.73427.346778.34833
INF1Young developing inflorescences (5mm)16.507819.440216.624216.7723
INF2Developing inflorescences (1-1.5 cm)22.366623.04119.933326.1689
ROORoots from the seedlings (10 cm shoot stage)6.820516.286567.566387.79598
NODDeveloping tillers at six leaf stage, 3rd internode18.480525.00215.539164.227
CAR5Developing grain, bracts removed (5 DPA)6.809545.178564.453885.69915
CAR15Developing grain, bracts removed (15 DPA)3.510962.571363.957928.7857



CDS Structure of MLOC_52843






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK371411
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371411CUST_22128_PI427708080NoneNoneNone
MLOC_26521.2NoneAvailableNonecontig_176217 (Mapped)
MLOC_41426.1NoneAvailableNonecontig_2588012 (Not mapped)
MLOC_47093.1NoneAvailableNonecontig_300552 (Not mapped)
MLOC_48623.1NoneAvailableNonecontig_326788 (Mapped)
MLOC_50096.1NoneAvailableNonecontig_354408 (Mapped)
MLOC_52843.1NoneAvailableAvailablecontig_37844 (Mapped)
MLOC_58971.1NoneAvailableNonecontig_431680 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----