- Predicted Gene MLOC_52836
MLOC_52836 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 14.6461 | 20.0933 | 19.5377 | 18.0436 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 19.7502 | 23.4909 | 23.835 | 18.086 |
| INF1 | Young developing inflorescences (5mm) | 12.0157 | 13.6611 | 15.3609 | 10.9902 |
| INF2 | Developing inflorescences (1-1.5 cm) | 16.8079 | 15.6931 | 15.4476 | 16.8583 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 15.2093 | 20.7915 | 16.1606 | 22.0955 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 18.2052 | 19.3094 | 15.9454 | 58.5807 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 18.7927 | 19.0635 | 19.6947 | 17.7749 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 8.99927 | 8.36358 | 8.56797 | 19.5653 |
CDS Structure of MLOC_52836
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52836.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os11g18880.1 |
+2 |
5e-174 |
521 |
319/539 (59%) |
13111.m01904 protein UBX domain-containing protein, putative, expressed |
| TAIR PP10 |
AT2G43210.2 |
+2 |
2e-70 |
245 |
181/531 (34%) |
Ubiquitin-like superfamily protein | chr2:17960942-17963560 FORWARD LENGTH=531 |