- Predicted Gene MLOC_52825
MLOC_52825 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 8.67925 | 9.72822 | 8.10698 | 8.51222 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 11.5981 | 22.1219 | 23.6143 | 14.1894 |
INF1 | Young developing inflorescences (5mm) | 11.4712 | 13.7108 | 14.7006 | 10.7301 |
INF2 | Developing inflorescences (1-1.5 cm) | 15.301 | 17.0875 | 16.9724 | 16.8652 |
ROO | Roots from the seedlings (10 cm shoot stage) | 12.7713 | 12.5787 | 9.61575 | 12.4673 |
NOD | Developing tillers at six leaf stage, 3rd internode | 6.40968 | 8.14627 | 8.12189 | 21.9885 |
CAR5 | Developing grain, bracts removed (5 DPA) | 13.3482 | 15.5391 | 16.7593 | 13.6966 |
CAR15 | Developing grain, bracts removed (15 DPA) | 6.21911 | 6.38942 | 7.79059 | 15.0697 |
CDS Structure of MLOC_52825
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52825.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g16620.5 |
-2 |
4e-50 |
174 |
133/191 (70%) |
13101.m15002 protein expressed protein |
TAIR PP10 | None | - | - | - | - | - |