MLOC_52825 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.679259.728228.106988.51222
LEAShoots from the seedlings (10 cm shoot stage)11.598122.121923.614314.1894
INF1Young developing inflorescences (5mm)11.471213.710814.700610.7301
INF2Developing inflorescences (1-1.5 cm)15.30117.087516.972416.8652
ROORoots from the seedlings (10 cm shoot stage)12.771312.57879.6157512.4673
NODDeveloping tillers at six leaf stage, 3rd internode6.409688.146278.1218921.9885
CAR5Developing grain, bracts removed (5 DPA)13.348215.539116.759313.6966
CAR15Developing grain, bracts removed (15 DPA)6.219116.389427.7905915.0697



CDS Structure of MLOC_52825






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_52825.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250920.1NoneNoneNoneNone
MLOC_52825.1CUST_3016_PI427708080AvailableAvailablecontig_37827 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g16620.5 -2 4e-50 174 133/191 (70%) 13101.m15002 protein expressed protein
TAIR PP10None-----