MLOC_52823 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.382171.872732.215072.38326
LEAShoots from the seedlings (10 cm shoot stage)1.754150.3110711.496631.18166
INF1Young developing inflorescences (5mm)1.33522.288381.536431.76905
INF2Developing inflorescences (1-1.5 cm)1.583211.869882.39952.39089
ROORoots from the seedlings (10 cm shoot stage)3.085473.048161.972524.19198
NODDeveloping tillers at six leaf stage, 3rd internode4.359825.300242.269416.5371
CAR5Developing grain, bracts removed (5 DPA)4.048374.325254.164234.81006
CAR15Developing grain, bracts removed (15 DPA)0.6820780.7237971.026321.99913



CDS Structure of MLOC_52823






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_52823.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249585.1NoneNoneNoneNone
MLOC_52823.1CUST_3015_PI427708080AvailableAvailablecontig_37823 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g41660.1 +3 3e-152 435 211/265 (80%) 13101.m04273 protein phosphoethanolamine/phosphocholine phosphatase, putative, expressed
TAIR PP10 AT4G29530.1 +3 1e-92 280 126/232 (54%) Pyridoxal phosphate phosphatase-related protein | chr4:14496164-14497310 FORWARD LENGTH=245