- Predicted Gene MLOC_52822
MLOC_52822 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.72465 | 0.573224 | 0.815996 | 0.597242 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.863593 | 0.937812 | 0.863285 | 0.681133 |
| INF1 | Young developing inflorescences (5mm) | 1.78414 | 1.64488 | 1.46005 | 1.26124 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.41477 | 1.85121 | 1.46092 | 1.57827 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.603438 | 0.837194 | 0.643994 | 0.794178 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.934094 | 0.504119 | 0.554922 | 1.4022 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.25056 | 0.898777 | 1.24022 | 0.939267 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.306434 | 0.258295 | 0.216124 | 0.55767 |
CDS Structure of MLOC_52822
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52822.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g41650.1 |
+2 |
0.0 |
1136 |
568/772 (74%) |
13101.m04272 protein pentatricopeptide, putative, expressed |
| TAIR PP10 |
AT4G13650.1 |
+2 |
2e-135 |
447 |
250/743 (34%) |
Pentatricopeptide repeat (PPR) superfamily protein | chr4:7939611-7942898 REVERSE LENGTH=1064 |