- Predicted Gene MLOC_52821
MLOC_52821 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 16.6971 | 17.8448 | 15.9633 | 17.5458 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 10.1403 | 6.62061 | 6.70166 | 6.71968 |
| INF1 | Young developing inflorescences (5mm) | 52.2545 | 50.772 | 48.5723 | 44.0266 |
| INF2 | Developing inflorescences (1-1.5 cm) | 80.7569 | 68.6346 | 70.3373 | 81.6847 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 11.7085 | 18.6174 | 15.9575 | 21.3763 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.5278 | 5.20615 | 8.082 | 19.6861 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 28.1439 | 25.9692 | 28.1049 | 27.6665 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 8.46924 | 7.6669 | 7.95677 | 18.9108 |
CDS Structure of MLOC_52821
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52821.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g41640.1 |
+1 |
0.0 |
781 |
441/525 (84%) |
13101.m04271 protein expressed protein |
| TAIR PP10 |
AT5G11780.1 |
+1 |
2e-39 |
152 |
155/512 (30%) |
unknown protein; Has 37 Blast hits to 37 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:3793928-3795983 FORWARD LENGTH=504 |