MLOC_52816 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains98.7839118.58799.92880
LEAShoots from the seedlings (10 cm shoot stage)76.770732.021913.61440
INF1Young developing inflorescences (5mm)166.253273.298211.230
INF2Developing inflorescences (1-1.5 cm)125.958106.40989.91590
ROORoots from the seedlings (10 cm shoot stage)202.843208.222257.120
NODDeveloping tillers at six leaf stage, 3rd internode156.46379.398421.16580
CAR5Developing grain, bracts removed (5 DPA)212.078204.678219.4690
CAR15Developing grain, bracts removed (15 DPA)78.551271.140378.76380



CDS Structure of MLOC_52816






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK251236.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251236.1CUST_23419_PI427708080NoneNoneNone
MLOC_26693.1NoneAvailableNonecontig_1772918 (Not mapped)
MLOC_26717.1NoneAvailableAvailablecontig_177477 (Not mapped)
MLOC_52816.1NoneAvailableNonecontig_37816 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----