MLOC_52805 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.699511.601312.542111.9569
LEAShoots from the seedlings (10 cm shoot stage)20.56065.702775.961039.39764
INF1Young developing inflorescences (5mm)9.320588.7335916.24988.16229
INF2Developing inflorescences (1-1.5 cm)12.39313.208314.224412.8049
ROORoots from the seedlings (10 cm shoot stage)17.33919.020723.386321.6048
NODDeveloping tillers at six leaf stage, 3rd internode26.590121.836116.998964.9296
CAR5Developing grain, bracts removed (5 DPA)20.133521.025919.344318.3414
CAR15Developing grain, bracts removed (15 DPA)8.273639.1109211.892919.2061



CDS Structure of MLOC_52805






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_52805.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_52805.1CUST_17730_PI427708080AvailableAvailablecontig_378047 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g13680.1 -1 2e-19 83 38/45 (84%) 13106.m01510 protein B12D protein, putative, expressed
TAIR PP10None-----