MLOC_52802 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.859826.940716.887016.71414
LEAShoots from the seedlings (10 cm shoot stage)8.305636.277337.068965.63854
INF1Young developing inflorescences (5mm)12.663113.124916.275810.5127
INF2Developing inflorescences (1-1.5 cm)10.14119.9206810.59689.50619
ROORoots from the seedlings (10 cm shoot stage)9.162267.687126.396428.19542
NODDeveloping tillers at six leaf stage, 3rd internode2.234534.27697.3521813.3704
CAR5Developing grain, bracts removed (5 DPA)8.304617.807418.875076.78752
CAR15Developing grain, bracts removed (15 DPA)4.250743.999582.696358.09224



CDS Structure of MLOC_52802






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_52802.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_52802.1NoneAvailableAvailablecontig_37803 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g03540.1 -3 5e-69 224 113/115 (98%) 13102.m00339 protein phosphoribosyl transferase, putative, expressed
TAIR PP10 AT2G44530.2 -3 2e-62 206 102/115 (89%) Phosphoribosyltransferase family protein | chr2:18383732-18385974 FORWARD LENGTH=393