MLOC_52798 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.597911.7477.818419.70914
LEAShoots from the seedlings (10 cm shoot stage)12.14744.132876.073726.29067
INF1Young developing inflorescences (5mm)7.431874.981855.277574.56396
INF2Developing inflorescences (1-1.5 cm)5.519068.043489.741227.65857
ROORoots from the seedlings (10 cm shoot stage)26.792714.39357.2693417.2643
NODDeveloping tillers at six leaf stage, 3rd internode21.828619.878522.369459.4478
CAR5Developing grain, bracts removed (5 DPA)4.216363.767464.039983.57351
CAR15Developing grain, bracts removed (15 DPA)1.539860.8065861.148592.48816



CDS Structure of MLOC_52798






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK250397.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250397.1CUST_18839_PI427708080NoneNoneNone
MLOC_38983.1NoneAvailableNonecontig_2551939 (Mapped)
MLOC_42483.1NoneAvailableNonecontig_2646846 (Not mapped)
MLOC_43288.1NoneAvailableNonecontig_26914 (Mapped)
MLOC_46282.1NoneAvailableNonecontig_288020 (Not mapped)
MLOC_50401.1NoneAvailableNonecontig_35949 (Mapped)
MLOC_52798.1NoneAvailableAvailablecontig_378 (Not mapped)
MLOC_58585.1NoneAvailableNonecontig_42801 (Mapped)
MLOC_71539.1NoneAvailableNonecontig_60029 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----