- Predicted Gene MLOC_52796
MLOC_52796 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 36.4971 | 36.9197 | 40.7239 | 33.4518 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 44.7684 | 39.9267 | 39.8598 | 32.0198 |
| INF1 | Young developing inflorescences (5mm) | 46.6862 | 52.5826 | 44.4787 | 35.8988 |
| INF2 | Developing inflorescences (1-1.5 cm) | 41.1444 | 47.0409 | 45.0005 | 42.7041 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 26.3321 | 41.686 | 37.3703 | 39.7848 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 37.2758 | 35.2281 | 38.9853 | 108.337 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 45.0924 | 46.3756 | 50.0295 | 39.1135 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 16.4782 | 13.7478 | 13.784 | 30.2594 |
CDS Structure of MLOC_52796
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52796.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g48700.1 |
-3 |
0.0 |
705 |
329/372 (88%) |
13106.m05182 protein DNA binding protein, putative, expressed |
| TAIR PP10 |
AT4G25870.1 |
-3 |
3e-158 |
467 |
213/379 (56%) |
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein | chr4:13149831-13151737 REVERSE LENGTH=389 |
