- Predicted Gene MLOC_52795
MLOC_52795 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.12574 | 2.26987 | 2.48587 | 2.36662 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.31525 | 1.17332 | 0.735868 | 0.935204 |
INF1 | Young developing inflorescences (5mm) | 0.98803 | 0.97611 | 0.944401 | 0.93881 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.43939 | 0.748027 | 0.941013 | 1.26617 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.68297 | 3.46175 | 6.71047 | 4.99927 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.99961 | 1.87999 | 1.95979 | 6.02989 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.29102 | 1.82156 | 2.75782 | 2.55856 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.97979 | 2.34137 | 1.66839 | 5.62192 |
CDS Structure of MLOC_52795
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52795.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g12900.1 |
+1 |
0.0 |
775 |
465/694 (67%) |
13107.m01341 protein cadmium/zinc-transporting ATPase, putative |
TAIR PP10 |
AT4G30110.1 |
+1 |
0.0 |
738 |
422/712 (59%) |
| Symbols: HMA2, ATHMA2 | heavy metal atpase 2 | chr4:14720253-14724577 REVERSE LENGTH=951 |