MLOC_52786 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.7289918.635916.656314.7093
LEAShoots from the seedlings (10 cm shoot stage)18.381711.461613.362312.689
INF1Young developing inflorescences (5mm)16.691717.83714.251312.6757
INF2Developing inflorescences (1-1.5 cm)14.19319.284121.19817.7244
ROORoots from the seedlings (10 cm shoot stage)7.9302914.458116.953515.7253
NODDeveloping tillers at six leaf stage, 3rd internode18.472219.041815.298860.2357
CAR5Developing grain, bracts removed (5 DPA)18.736713.595513.007313.3349
CAR15Developing grain, bracts removed (15 DPA)7.274217.770795.1558315.0958



CDS Structure of MLOC_52786






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_52786.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_52786.1CUST_12718_PI427708083AvailableAvailablecontig_377937 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g42750.2 +2 4e-12 64 34/43 (79%) 13103.m04595 protein roothairless 1, putative, expressed
TAIR PP10None-----