MLOC_5276 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.0505895 | 0.0452874 | 0 | 0.0629148 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
| INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0.126679 | 0.0560573 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0643777 | 0 | 0.0139102 | 0.0240185 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 42.2073 | 30.7658 | 22.2699 | 33.5512 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 8.21998 | 10.2996 | 10.5004 | 25.0713 |
CDS Structure of MLOC_5276
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5276.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g43010.2 |
-2 |
5e-128 |
379 |
175/215 (81%) |
13102.m04772 protein vacuolar-processing enzyme precursor, putative, expressed |
| TAIR PP10 |
AT1G62710.1 |
-2 |
2e-115 |
347 |
162/215 (75%) |
| Symbols: BETA-VPE, BETAVPE | beta vacuolar processing enzyme | chr1:23224070-23226857 REVERSE LENGTH=486 |