MLOC_52753 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.896673.543544.074673.79243
LEAShoots from the seedlings (10 cm shoot stage)0.2701010.1426630.1064520.144729
INF1Young developing inflorescences (5mm)0.08879270.1046430.01833850.0682121
INF2Developing inflorescences (1-1.5 cm)0.0478770.04577440.07581340.0693974
ROORoots from the seedlings (10 cm shoot stage)8.850916.89816.727197.81306
NODDeveloping tillers at six leaf stage, 3rd internode7.351258.419366.7228721.7968
CAR5Developing grain, bracts removed (5 DPA)0.03961520.2079320.1116960.134813
CAR15Developing grain, bracts removed (15 DPA)0.01308890.015369100.0482201



CDS Structure of MLOC_52753






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_52753.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362821NoneNoneNoneNone
MLOC_52753.1CUST_18087_PI427708080AvailableAvailablecontig_37767 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g08120.1 -1 0.0 776 447/591 (76%) 13106.m00849 protein plant protein of unknown function domain containing protein, expressed
TAIR PP10 AT3G02645.1 -1 1e-111 354 212/525 (40%) Plant protein of unknown function (DUF247) | chr3:566271-567860 FORWARD LENGTH=529