- Predicted Gene MLOC_52751
MLOC_52751 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.129815 | 0.266273 | 0.504393 | 0.308799 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0.201274 | 0.0579807 |
| INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.17288 | 0 | 0 | 0.0689181 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.119384 | 0.136768 | 0.152935 | 0.151279 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.113735 | 0.25494 | 0 | 0.538884 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.0562202 | 0.0528599 | 0.0542159 | 0.0557821 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0.14878 | 0.185632 | 0.278696 |
CDS Structure of MLOC_52751
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52751.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g56235.1 |
+3 |
6e-115 |
340 |
189/267 (71%) |
13101.m05947 protein expressed protein |
| TAIR PP10 |
AT1G16520.1 |
+3 |
9e-62 |
202 |
125/267 (47%) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56080.1); Has 243 Blast hits to 234 proteins in 69 species: Archae - 2; Bacteria - 2; Metazoa - 61; Fungi - 9; Plants - 125; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). | chr1:5648904-5650998 FORWARD LENGTH=325 |