MLOC_5274 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 8.53214 | 7.02662 | 8.00231 | 7.30081 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 5.91227 | 10.6717 | 18.8835 | 8.91176 |
| INF1 | Young developing inflorescences (5mm) | 4.13965 | 7.03007 | 4.758 | 4.45642 |
| INF2 | Developing inflorescences (1-1.5 cm) | 2.40189 | 2.42648 | 2.01588 | 2.43009 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 11.6582 | 7.66954 | 6.86782 | 9.00145 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.50444 | 4.35879 | 5.36039 | 11.6633 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.22145 | 5.13763 | 4.19917 | 4.68741 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.30079 | 1.11037 | 0.868107 | 2.72635 |
CDS Structure of MLOC_5274
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5274.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g45280.2 |
+1 |
3e-93 |
277 |
128/161 (80%) |
13104.m04540 protein histidine triad family protein, putative, expressed |
| TAIR PP10 |
AT4G16566.1 |
+1 |
2e-62 |
197 |
90/137 (66%) |
| Symbols: HINT4 | histidine triad nucleotide-binding 4 | chr4:9334873-9335884 REVERSE LENGTH=146 |
