MLOC_52739 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains29.160531.964131.35460
LEAShoots from the seedlings (10 cm shoot stage)31.675124.922943.58910
INF1Young developing inflorescences (5mm)15.643418.739123.65570
INF2Developing inflorescences (1-1.5 cm)31.562530.023527.60990
ROORoots from the seedlings (10 cm shoot stage)31.774531.830117.76830
NODDeveloping tillers at six leaf stage, 3rd internode32.886550.852240.16820
CAR5Developing grain, bracts removed (5 DPA)31.053137.93225.96920
CAR15Developing grain, bracts removed (15 DPA)13.121213.035613.40710



CDS Structure of MLOC_52739






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK249609.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249609.1CUST_18716_PI427708080NoneNoneNone
MLOC_21322.2NoneAvailableAvailablecontig_1594273 (Not mapped)
MLOC_52739.1NoneAvailableNonecontig_37760 (Not mapped)
MLOC_77971.5NoneAvailableNonecontig_78132 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----