MLOC_52726 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.740216.152349.028240
LEAShoots from the seedlings (10 cm shoot stage)3.124922.037033.914010
INF1Young developing inflorescences (5mm)6.852319.008589.348230
INF2Developing inflorescences (1-1.5 cm)12.43668.68459.396810
ROORoots from the seedlings (10 cm shoot stage)12.83045.949243.459540
NODDeveloping tillers at six leaf stage, 3rd internode1.088672.844234.622230
CAR5Developing grain, bracts removed (5 DPA)6.6634610.01838.049470
CAR15Developing grain, bracts removed (15 DPA)2.217254.062732.987290



CDS Structure of MLOC_52726






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK249692.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249692.1CUST_23284_PI427708080NoneNoneNone
MLOC_22778.1NoneAvailableNonecontig_161178 (Mapped)
MLOC_46889.1NoneAvailableAvailablecontig_297237 (Not mapped)
MLOC_52726.1NoneAvailableNonecontig_377431 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----