MLOC_52717 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains42.236325.431528.419828.5652
LEAShoots from the seedlings (10 cm shoot stage)26.35312.879921.546116.0176
INF1Young developing inflorescences (5mm)16.291620.763820.885115.0165
INF2Developing inflorescences (1-1.5 cm)13.545813.374613.715213.6164
ROORoots from the seedlings (10 cm shoot stage)47.324530.574828.420635.7034
NODDeveloping tillers at six leaf stage, 3rd internode41.976849.046242.0193128.93
CAR5Developing grain, bracts removed (5 DPA)17.222314.331614.832113.7871
CAR15Developing grain, bracts removed (15 DPA)4.73365.359135.2196610.8907



CDS Structure of MLOC_52717






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK248159.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248159.1CUST_18513_PI427708080NoneNoneNone
MLOC_52717.1NoneAvailableAvailablecontig_37738 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----