MLOC_5271 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.048761.269080.6142921.07131
LEAShoots from the seedlings (10 cm shoot stage)3.96152.240082.177662.30919
INF1Young developing inflorescences (5mm)12.480310.14679.023149.21805
INF2Developing inflorescences (1-1.5 cm)1.863070.8324629.200733.45579
ROORoots from the seedlings (10 cm shoot stage)12.16167.306227.224279.17261
NODDeveloping tillers at six leaf stage, 3rd internode12.47114.424.5571736.389
CAR5Developing grain, bracts removed (5 DPA)2.112410.5316340.2022080.903914
CAR15Developing grain, bracts removed (15 DPA)0.1955090.269720.1210370.523533



CDS Structure of MLOC_5271






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_5271.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361869NoneNoneNoneNone
MLOC_5271.1CUST_390_PI427708080AvailableAvailablecontig_136087 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g19010.1 +1 6e-178 543 380/664 (57%) 13106.m02028 protein cadmium tolerance factor, putative, expressed
TAIR PP10None-----