- Predicted Gene MLOC_52708
MLOC_52708 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 9.58328 | 9.58641 | 10.0888 | 10.4937 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 21.1444 | 16.8932 | 18.4716 | 15.8194 |
| INF1 | Young developing inflorescences (5mm) | 4.7857 | 5.8235 | 5.49157 | 5.06065 |
| INF2 | Developing inflorescences (1-1.5 cm) | 7.58668 | 6.24969 | 6.31072 | 8.24493 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 37.2585 | 21.2664 | 26.2581 | 28.9897 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 36.2509 | 39.1386 | 32.8133 | 112.913 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 11.3106 | 15.4687 | 13.9445 | 15.4955 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 10.0778 | 11.3873 | 10.4903 | 28.7067 |
CDS Structure of MLOC_52708
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52708.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g35680.1 |
-2 |
3e-156 |
454 |
225/268 (84%) |
13109.m03493 protein OsFBX339 - F-box domain containing protein, expressed |
| TAIR PP10 |
AT3G61060.1 |
-2 |
3e-104 |
320 |
156/267 (58%) |
| Symbols: AtPP2-A13, PP2-A13 | phloem protein 2-A13 | chr3:22603166-22604336 FORWARD LENGTH=290 |