- Predicted Gene MLOC_52707
MLOC_52707 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 19.7145 | 17.1037 | 18.0742 | 19.5393 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 32.1865 | 33.0821 | 22.787 | 25.9533 |
| INF1 | Young developing inflorescences (5mm) | 0.0362278 | 0.0397102 | 0.233596 | 0.0954179 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.0368437 | 0.169714 | 0.233946 | 0.167854 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 21.248 | 26.3094 | 27.6313 | 34.219 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 85.8597 | 58.3472 | 96.7476 | 201.07 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 6.6486 | 6.07635 | 6.08858 | 6.38471 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 36.8825 | 35.4328 | 30.8492 | 88.0197 |
CDS Structure of MLOC_52707
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52707.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g35690.1 |
+1 |
7e-103 |
306 |
146/174 (84%) |
13109.m03494 protein zinc RING finger protein, putative, expressed |
| TAIR PP10 |
AT3G63530.2 |
+1 |
5e-32 |
123 |
56/109 (51%) |
| Symbols: BB, BB2 | RING/U-box superfamily protein | chr3:23456407-23457787 REVERSE LENGTH=248 |