- Predicted Gene MLOC_52678
MLOC_52678 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 14.4773 | 8.96827 | 9.7519 | 12.0241 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 4.28231 | 2.01018 | 2.66332 | 2.97064 |
| INF1 | Young developing inflorescences (5mm) | 23.3167 | 23.6265 | 22.2822 | 21.2531 |
| INF2 | Developing inflorescences (1-1.5 cm) | 18.6514 | 21.814 | 19.0092 | 23.5996 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 12.6354 | 9.19299 | 10.1093 | 13.1773 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.68059 | 2.18373 | 3.91195 | 7.88603 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 4.44534 | 5.44611 | 4.97598 | 5.66256 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.54025 | 0.730767 | 1.23783 | 3.18663 |
CDS Structure of MLOC_52678
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52678.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g40940.1 |
-2 |
4e-89 |
281 |
155/178 (87%) |
13104.m04005 protein mitotic spindle checkpoint protein MAD2, putative, expressed |
| TAIR PP10 |
AT3G25980.2 |
-2 |
8e-83 |
263 |
142/179 (79%) |
| Symbols: MAD2 | DNA-binding HORMA family protein | chr3:9503232-9504402 FORWARD LENGTH=205 |