MLOC_52665 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.023772.031882.758542.09994
LEAShoots from the seedlings (10 cm shoot stage)1.071440.9455110.2160170.656551
INF1Young developing inflorescences (5mm)15.970920.58328.971619.3279
INF2Developing inflorescences (1-1.5 cm)49.927441.271939.735950.5036
ROORoots from the seedlings (10 cm shoot stage)0.2685811.890321.571062.07734
NODDeveloping tillers at six leaf stage, 3rd internode1.596860.3864443.212632.83091
CAR5Developing grain, bracts removed (5 DPA)0.7837770.7150430.7919690.778959
CAR15Developing grain, bracts removed (15 DPA)0.1064910.35017400.743994



CDS Structure of MLOC_52665






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_52665.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_52665.1CUST_12717_PI427708083AvailableAvailablecontig_37694 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g43710.1 -1 7e-11 60 46/56 (82%) 13104.m04346 protein CAMK_CAMK_like.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
TAIR PP10None-----