MLOC_52662 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.05803640.3369660.189942
LEAShoots from the seedlings (10 cm shoot stage)0.4997171.296742.191541.21666
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)00.063251400.301649
NODDeveloping tillers at six leaf stage, 3rd internode0000.0061736
CAR5Developing grain, bracts removed (5 DPA)00.1037480.1220310.118789
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_52662






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_52662.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_52662.1CUST_7428_PI427708083AvailableAvailablecontig_37691 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g17470.1 +2 2e-15 76 38/63 (60%) 13103.m02084 protein IN2-1 protein, putative, expressed
TAIR PP10None-----