MLOC_52654 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains18.589510.624816.96460
LEAShoots from the seedlings (10 cm shoot stage)16.235818.171516.82980
INF1Young developing inflorescences (5mm)11.096115.28319.78740
INF2Developing inflorescences (1-1.5 cm)13.783519.856919.21890
ROORoots from the seedlings (10 cm shoot stage)24.853127.951411.25430
NODDeveloping tillers at six leaf stage, 3rd internode8.0439213.0549.483790
CAR5Developing grain, bracts removed (5 DPA)19.738822.177213.19350
CAR15Developing grain, bracts removed (15 DPA)3.151327.68294.710090



CDS Structure of MLOC_52654






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK374748
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374748CUST_25911_PI427708080NoneNoneNone
MLOC_49709.1NoneAvailableAvailablecontig_346686 (Mapped)
MLOC_52654.1NoneAvailableNonecontig_376853 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----