- Predicted Gene MLOC_52653
MLOC_52653 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_52653_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_52653_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 2.90267 | 2.74916 | 3.40771 | 2.57285 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 16.6652 | 23.0368 | 21.4941 | 14.0179 |
INF1 | Young developing inflorescences (5mm) | 2.29195 | 2.49164 | 1.96328 | 1.69484 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.48201 | 2.17637 | 3.11423 | 2.38872 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.69364 | 1.81592 | 4.27722 | 2.20927 |
NOD | Developing tillers at six leaf stage, 3rd internode | 18.4304 | 20.365 | 26.8428 | 53.6544 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.60655 | 7.47317 | 8.03991 | 6.45246 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.18314 | 1.40213 | 1.21333 | 2.61214 |
CDS Structure of MLOC_52653
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52653.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g24480.1 |
+2 |
2e-89 |
303 |
142/171 (83%) |
13101.m02589 protein DUF1399 containing protein, putative, expressed |
TAIR PP10 |
AT4G31115.1 |
-2 |
2e-52 |
188 |
90/159 (57%) |
Protein of unknown function (DUF1997) | chr4:15130243-15131847 FORWARD LENGTH=250 |