- Predicted Gene MLOC_52639
MLOC_52639 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_52639_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_52639_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 2.03888 | 1.59679 | 1.56546 | 1.69715 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.01892 | 0.704403 | 0.852158 | 0.698353 |
INF1 | Young developing inflorescences (5mm) | 7.21967 | 6.30312 | 5.61941 | 5.49142 |
INF2 | Developing inflorescences (1-1.5 cm) | 4.84962 | 5.576 | 5.07438 | 5.80222 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.47611 | 1.85901 | 1.8348 | 1.9683 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.50633 | 0.479424 | 0.894916 | 1.58769 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.80652 | 2.52686 | 2.56847 | 2.27375 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.99858 | 0.677387 | 1.17478 | 2.19348 |
CDS Structure of MLOC_52639
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52639.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g49060.1 |
+1 |
0.0 |
738 |
395/516 (77%) |
13106.m05232 protein ternary complex factor MIP1, putative, expressed |
TAIR PP10 |
AT3G13000.1 |
+1 |
2e-171 |
521 |
279/515 (54%) |
Protein of unknown function, DUF547 | chr3:4158214-4160818 REVERSE LENGTH=553 |