- Predicted Gene MLOC_52605
MLOC_52605 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_52605_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_52605_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 25.7346 | 16.562 | 21.7211 | 21.9257 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 8.0134 | 9.39066 | 16.8262 | 10.6281 |
INF1 | Young developing inflorescences (5mm) | 2.80154 | 4.40522 | 4.22825 | 3.98789 |
INF2 | Developing inflorescences (1-1.5 cm) | 3.76373 | 3.33141 | 3.03366 | 4.4448 |
ROO | Roots from the seedlings (10 cm shoot stage) | 24.0698 | 11.8795 | 18.8974 | 18.2482 |
NOD | Developing tillers at six leaf stage, 3rd internode | 3.97792 | 4.05859 | 8.69691 | 16.5501 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.05469 | 1.47399 | 1.03778 | 1.47145 |
CAR15 | Developing grain, bracts removed (15 DPA) | 7.10354 | 8.44967 | 7.5205 | 22.5743 |
CDS Structure of MLOC_52605
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52605.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g42120.1 |
+3 |
4e-96 |
288 |
149/198 (75%) |
13105.m04479 protein heat shock protein, putative, expressed |
TAIR PP10 |
AT5G54660.1 |
+3 |
1e-50 |
170 |
90/181 (50%) |
HSP20-like chaperones superfamily protein | chr5:22203950-22204986 FORWARD LENGTH=192 |