MLOC_52595 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains15.140314.662614.524110.9467
LEAShoots from the seedlings (10 cm shoot stage)14.280311.378116.52729.19948
INF1Young developing inflorescences (5mm)3.481744.907324.754812.51485
INF2Developing inflorescences (1-1.5 cm)4.42343.818794.122083.31246
ROORoots from the seedlings (10 cm shoot stage)10.837415.927610.666612.3689
NODDeveloping tillers at six leaf stage, 3rd internode27.285419.325625.301252.5686
CAR5Developing grain, bracts removed (5 DPA)23.824724.172725.955416.5088
CAR15Developing grain, bracts removed (15 DPA)25.065328.970722.560540.0129



CDS Structure of MLOC_52595






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_52595.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_52595.1CUST_12716_PI427708083AvailableAvailablecontig_37643 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g06070.1 -3 6e-53 193 100/138 (72%) 13103.m00662 protein la domain containing protein, putative, expressed
TAIR PP10None-----