MLOC_52592 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains25.821730.725930.174827.6324
LEAShoots from the seedlings (10 cm shoot stage)23.196911.34115.0053310.7001
INF1Young developing inflorescences (5mm)48.566642.073149.669938.8945
INF2Developing inflorescences (1-1.5 cm)36.504344.725962.995348.1994
ROORoots from the seedlings (10 cm shoot stage)21.199417.534838.730221.6183
NODDeveloping tillers at six leaf stage, 3rd internode22.59058.813537.408335.1402
CAR5Developing grain, bracts removed (5 DPA)69.818472.163378.082866.9406
CAR15Developing grain, bracts removed (15 DPA)18.95798.3796616.638932.1429



CDS Structure of MLOC_52592






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_52592.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_52592.1CUST_12714_PI427708083AvailableAvailablecontig_376412 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g71300.3 +2 1e-19 82 37/44 (84%) 13101.m07765 protein S-formylglutathione hydrolase, putative, expressed
TAIR PP10None-----