- Predicted Gene MLOC_52585
MLOC_52585 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.94682 | 1.09753 | 0.405555 | 0.785497 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 16.6239 | 27.7314 | 27.2253 | 17.4391 |
| INF1 | Young developing inflorescences (5mm) | 2.5401 | 3.1472 | 4.52086 | 2.21525 |
| INF2 | Developing inflorescences (1-1.5 cm) | 2.39697 | 2.24433 | 2.45618 | 2.13798 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.157706 | 0.59642 | 1.04177 | 0.570584 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.0695 | 3.05961 | 3.58825 | 9.48246 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.38916 | 2.10216 | 2.46039 | 1.83277 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.501629 | 0.334933 | 0.684622 | 0.895442 |
CDS Structure of MLOC_52585
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52585.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g19760.1 |
+2 |
2e-104 |
348 |
193/232 (83%) |
13103.m02369 protein HAD-superfamily hydrolase, subfamily IA, variant 3 containing protein, expressed |
| TAIR PP10 |
AT1G56500.1 |
+2 |
6e-65 |
234 |
130/227 (57%) |
haloacid dehalogenase-like hydrolase family protein | chr1:21159775-21167092 FORWARD LENGTH=1055 |