- Predicted Gene MLOC_52583
MLOC_52583 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.8115 | 4.36202 | 5.14501 | 3.11284 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 12.3082 | 5.3228 | 4.47611 | 5.40405 |
| INF1 | Young developing inflorescences (5mm) | 3.24045 | 5.2106 | 4.63076 | 2.42973 |
| INF2 | Developing inflorescences (1-1.5 cm) | 5.27695 | 5.51482 | 6.2663 | 4.67915 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 4.84299 | 5.85412 | 7.53041 | 5.00309 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.78174 | 2.32257 | 2.4056 | 6.6346 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 6.29398 | 6.4765 | 5.85066 | 4.48731 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 11.8385 | 11.5145 | 12.6752 | 18.3751 |
CDS Structure of MLOC_52583
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52583.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os11g14170.1 |
-3 |
2e-35 |
134 |
65/81 (80%) |
13111.m01449 protein OsDegp12 - Putative Deg protease homologue, expressed |
| TAIR PP10 |
AT5G27660.1 |
-3 |
1e-26 |
108 |
48/71 (68%) |
Trypsin family protein with PDZ domain | chr5:9789835-9792235 REVERSE LENGTH=428 |