- Predicted Gene MLOC_52579
MLOC_52579 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 18.7287 | 29.8737 | 24.9895 | 27.2036 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 20.3162 | 16.3438 | 15.267 | 15.0798 |
| INF1 | Young developing inflorescences (5mm) | 128.747 | 108.476 | 127.488 | 104.263 |
| INF2 | Developing inflorescences (1-1.5 cm) | 24.257 | 14.614 | 49.7298 | 28.8263 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 30.3242 | 31.5168 | 27.3619 | 38.666 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 24.5426 | 29.9803 | 10.8569 | 87.9426 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 27.2575 | 12.4575 | 11.2574 | 16.511 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.10493 | 3.95679 | 4.05218 | 9.51212 |
CDS Structure of MLOC_52579
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52579.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g10640.1 |
+2 |
0.0 |
1800 |
921/1017 (91%) |
13103.m01194 protein calcium-transporting ATPase, plasma membrane-type, putative, expressed |
| TAIR PP10 |
AT4G37640.1 |
+2 |
0.0 |
1573 |
802/1018 (79%) |
| Symbols: ACA2 | calcium ATPase 2 | chr4:17683225-17686808 REVERSE LENGTH=1014 |