MLOC_5254 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.059371.342091.538831.50543
LEAShoots from the seedlings (10 cm shoot stage)3.382370.2716770.8349131.24221
INF1Young developing inflorescences (5mm)0.08426110.03306370.07049770.0591918
INF2Developing inflorescences (1-1.5 cm)0.06117330.2659920.1818760.242927
ROORoots from the seedlings (10 cm shoot stage)0.4946181.339380.6880011.49364
NODDeveloping tillers at six leaf stage, 3rd internode0.047574000.00306068
CAR5Developing grain, bracts removed (5 DPA)2.360311.897012.100512.40348
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_5254






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_5254.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_5254.1CUST_7414_PI427708083AvailableAvailablecontig_136060 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g06900.1 +3 0.0 540 278/337 (82%) 13111.m00701 protein amidase family protein, putative, expressed
TAIR PP10 AT5G64440.1 +3 2e-81 263 150/330 (45%) | Symbols: AtFAAH, FAAH | fatty acid amide hydrolase | chr5:25766229-25770260 FORWARD LENGTH=607