MLOC_5253 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_5253_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_5253_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 3.42202 | 6.13154 | 5.93683 | 6.54294 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 6.72371 | 2.53123 | 2.14467 | 3.72255 |
INF1 | Young developing inflorescences (5mm) | 26.5805 | 25.1413 | 22.4626 | 23.7835 |
INF2 | Developing inflorescences (1-1.5 cm) | 42.9384 | 38.3914 | 36.5689 | 49.4326 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.43445 | 4.5491 | 3.73313 | 6.68569 |
NOD | Developing tillers at six leaf stage, 3rd internode | 10.7188 | 10.6677 | 11.7423 | 47.691 |
CAR5 | Developing grain, bracts removed (5 DPA) | 15.7217 | 13.8709 | 15.5755 | 17.1067 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.51259 | 4.59499 | 4.91793 | 11.9027 |
CDS Structure of MLOC_5253
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5253.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g06910.2 |
+3 |
0.0 |
1135 |
646/900 (72%) |
13111.m00703 protein myosin heavy chain-related, putative, expressed |
TAIR PP10 |
AT1G77580.2 |
+3 |
8e-95 |
323 |
262/781 (34%) |
Plant protein of unknown function (DUF869) | chr1:29144191-29146793 REVERSE LENGTH=779 |