MLOC_52520 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains37.616135.265838.14060
LEAShoots from the seedlings (10 cm shoot stage)20.33396.619278.725150
INF1Young developing inflorescences (5mm)15.745516.066215.97190
INF2Developing inflorescences (1-1.5 cm)13.280815.873411.72170
ROORoots from the seedlings (10 cm shoot stage)35.599352.102258.98530
NODDeveloping tillers at six leaf stage, 3rd internode12.66228.883343.854710
CAR5Developing grain, bracts removed (5 DPA)14.994414.527116.71030
CAR15Developing grain, bracts removed (15 DPA)2.372622.133981.695940



CDS Structure of MLOC_52520






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK372459
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372459CUST_22318_PI427708080NoneNoneNone
MLOC_18390.1NoneAvailableNonecontig_1580384 (Mapped)
MLOC_52520.1NoneAvailableNonecontig_37586 (Mapped)
MLOC_74684.1NoneAvailableAvailablecontig_6634 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----