- Predicted Gene MLOC_52515
MLOC_52515 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 5.84887 | 6.72496 | 5.58969 | 6.52237 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 213.965 | 440.235 | 535.182 | 333.475 |
| INF1 | Young developing inflorescences (5mm) | 9.85069 | 9.96887 | 9.89433 | 9.27118 |
| INF2 | Developing inflorescences (1-1.5 cm) | 6.20853 | 8.17868 | 7.58536 | 8.97381 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.915374 | 1.29279 | 2.76162 | 1.67176 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 76.0004 | 130.962 | 176.94 | 391.98 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 96.9114 | 119.949 | 112.27 | 120.427 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 13.393 | 17.9167 | 13.6141 | 40.5876 |
CDS Structure of MLOC_52515
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52515.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g03720.1 |
-3 |
0.0 |
752 |
392/429 (91%) |
13103.m00369 protein glyceraldehyde-3-phosphate dehydrogenase, putative, expressed |
| TAIR PP10 |
AT1G42970.1 |
-3 |
0.0 |
665 |
358/436 (82%) |
| Symbols: GAPB | glyceraldehyde-3-phosphate dehydrogenase B subunit | chr1:16127552-16129584 FORWARD LENGTH=447 |
