MLOC_52496 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains43.792256.951155.88848.1548
LEAShoots from the seedlings (10 cm shoot stage)44.84750.889258.560239.0806
INF1Young developing inflorescences (5mm)22.535225.089823.478118.15
INF2Developing inflorescences (1-1.5 cm)17.548821.954521.201520.3291
ROORoots from the seedlings (10 cm shoot stage)62.069972.722180.370774.6102
NODDeveloping tillers at six leaf stage, 3rd internode73.170248.387447.0211141.551
CAR5Developing grain, bracts removed (5 DPA)40.481441.060941.675536.6738
CAR15Developing grain, bracts removed (15 DPA)18.357817.932318.05438.2818



CDS Structure of MLOC_52496






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK355913
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355913CUST_23847_PI427708080NoneNoneNone
MLOC_52496.1NoneAvailableAvailablecontig_37568 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----