MLOC_52443 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.7033393.183582.145520
LEAShoots from the seedlings (10 cm shoot stage)2.39811.5865300
INF1Young developing inflorescences (5mm)1.650711.601472.237780
INF2Developing inflorescences (1-1.5 cm)0.4637772.11312.093580
ROORoots from the seedlings (10 cm shoot stage)0.4808651.530363.515840
NODDeveloping tillers at six leaf stage, 3rd internode2.819920.8005910.879520
CAR5Developing grain, bracts removed (5 DPA)1.549533.1260.7407440
CAR15Developing grain, bracts removed (15 DPA)1.141350.8347030.3698610



CDS Structure of MLOC_52443






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK359286
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK359286NoneNoneNoneNone
MLOC_29087.1NoneAvailableNonecontig_1973511 (Not mapped)
MLOC_52443.1NoneAvailableNonecontig_375338 (Mapped)
MLOC_68181.1NoneAvailableAvailablecontig_543419 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----