MLOC_52442 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.61701100.297668
LEAShoots from the seedlings (10 cm shoot stage)0.59283000.227937
INF1Young developing inflorescences (5mm)0.8677160.32557300.426333
INF2Developing inflorescences (1-1.5 cm)1.291380.6867950.3253010.894188
ROORoots from the seedlings (10 cm shoot stage)2.834440.9798510.0001622181.42348
NODDeveloping tillers at six leaf stage, 3rd internode0.7312480.5639230.5090971.95808
CAR5Developing grain, bracts removed (5 DPA)0.7116740.7621310.5503530.659901
CAR15Developing grain, bracts removed (15 DPA)0.6300320.85061801.17006



CDS Structure of MLOC_52442






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_52442.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_52442.1NoneAvailableAvailablecontig_375338 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----