MLOC_52440 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.453991.727332.73472.16126
LEAShoots from the seedlings (10 cm shoot stage)8.862613.716692.600824.09666
INF1Young developing inflorescences (5mm)0.7803040.2544541.922320.639577
INF2Developing inflorescences (1-1.5 cm)0.5800720.7068241.065580.682581
ROORoots from the seedlings (10 cm shoot stage)14.01466.500921.789168.02159
NODDeveloping tillers at six leaf stage, 3rd internode3.295118.286.4412222.6698
CAR5Developing grain, bracts removed (5 DPA)0.2543810.8898141.128410.567969
CAR15Developing grain, bracts removed (15 DPA)1.391960.5724590.4187491.99201



CDS Structure of MLOC_52440






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_52440.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_52440.1CUST_4860_PI427708086AvailableAvailablecontig_375312 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----