- Predicted Gene MLOC_52439
MLOC_52439 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.50229 | 4.13687 | 3.676 | 4.04568 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 11.0725 | 14.2036 | 5.99833 | 9.34727 |
| INF1 | Young developing inflorescences (5mm) | 24.6778 | 18.8993 | 26.9068 | 20.0611 |
| INF2 | Developing inflorescences (1-1.5 cm) | 39.5789 | 56.5564 | 51.8507 | 54.6759 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 16.2795 | 37.5711 | 31.272 | 45.4527 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 26.6126 | 25.2827 | 10.5544 | 84.0162 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 18.5298 | 17.8692 | 21.4295 | 19.1084 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 40.6384 | 45.9869 | 43.1989 | 98.0376 |
CDS Structure of MLOC_52439
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52439.6
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g37970.1 |
-1 |
8e-131 |
387 |
195/242 (81%) |
13112.m03911 protein MYB family transcription factor, putative, expressed |
| TAIR PP10 |
AT5G59780.3 |
-1 |
6e-77 |
246 |
138/231 (60%) |
| Symbols: MYB59, ATMYB59-3 | myb domain protein 59 | chr5:24082425-24083350 REVERSE LENGTH=235 |